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Selected Publications


Journal Articles

  • Zhang Z.+, Presgraves DC. 2017. Translational compensation of gene copy number alterations by aneuploidy in Drosophila melanogaster. Nucleic Acid Research gkx106. doi: 10.1093/nar/gkx106 View and Download
  • Zhang Z.+, Presgraves DC. 2015. Drosophila X-linked Genes Have Lower Translation Rates than Autosomal Genes. Molecular Biology and Evolution doi:10.1093/molbev/msv227. View and Download
  • Wang M., Zhang P., Shu Y., Yuan F., Zhang Y., Zhou Y., Jiang M., Zhu Y., Hu L., Kong X.+, and Zhang Z.+. 2014. Alternative splicing at GYNNGY 5' splice sites:  more noise, less regulation. Nucleic Acid Research View and Download
  • Zhang Z+, Klein J, Nei M. 2014. Evolution of the Sex-lethal Gene in Insects and Origin of the Sex-Determination System in Drosophila.J Mol Evol, 78, 50-65. View and Download
  • Zhang Z+, Hu L, Kong X+: MicroRNA or NMD: Why Have Two RNA Silencing Systems? J Genet Genomics 2013, 40(10):497-513.View and Download (Cover Article)
  • Miura S, Zhang Z, Nei M: Random fluctuation of selection coefficients and the extent of nucleotide variation in human populations. Proc Natl Acad Sci U S A 2013, 110(26):10676-10681. View and Download
  • Zhang L*, Zhang Z*, Weng Z: Rapid Reassortment of Internal Genes in Avian Influenza A(H7N9) Virus. Clin Infect Dis 2013, 57(7):1059-1061.View and Download
  • Zhang L, Zhang Z, Weng Z, Shi W: Substitution rates of the internal genes in the novel avian H7N9 influenza virus. Clin Infect Dis 2013, 57(8):1213-1215.View and Download
  • Liu, Y., H. Xu, S. Chen, X. Chen, Z. Zhang, Z. Zhu, X. Qin, L. Hu, J. Zhu, G. P. Zhao, and X. Kong. 2011. Genome-wide interaction-based association analysis identified multiple new susceptibility Loci for common diseases. PLoS Genet 7:e1001338. View and Download
  • Zhou L, Zhang Z , Zheng Y, Zhu Y, Wei Z, Xu H, Tang Q, Kong X, Hu L: SKAP2, a novel target of HSF4b, associates with NCK2/F-actin at membrane ruffles and regulates actin reorganization in lens cell. J Cell Mol Med 2010 Mar 9. [Epub ahead of print] . View and Download file download
  • Zhang Z, Zhou L, Hu L, Zhu Y, Xu H, Liu Y, Chen X, Yi X, Kong X, Hurst LD: Nonsense-mediated decay targets have multiple sequence-related features that can inhibit translation. Mol Syst Biol 2010, 6 View and Download
  • Zhang Z , Xin D, Wang P, Zhou L, Hu L, Kong X, Hurst LD: Noisy splicing, more than expression regulation, explains why some exons are subject to nonsense-mediated mRNA decay. BMC Biol 2009, 7: 23. View and Download
  • Zhang Z *, Zhou L*, Wang P, Liu Y, Chen X, Hu L, Kong X. Divergence of exonic splicing elements after gene duplication and the impact on gene structures. Genome Biol . 2009 Nov 2; 10(11):R120. View and Download Highly Accessed
  • Wang P, Yin S, Zhang Z, Xin D, Hu L, Kong X, Hurst LD: Evidence for common short natural trans sense-antisense pairing between transcripts from protein coding genes. Genome Biol 2008, 9: R169. View and Download Highly Accessed

Book Chapters

Preprints

  • Zhang, L., and Z. Zhang§. 2013. The Origin of human-infecting avian influenza A H6N1 virus. bioRxiv. doi: http://dx.doi.org/10.1101/000398
  • Z. Zhang. 2015. CUA: a Flexible and Comprehensive Codon Usage Analyzer. bioRxiv. doi: http://dx.doi.org/10.1101/022814

 

*: Contribute equally to the work.

+: Corresponding author

See Google Scholar for all publications and citations

Posters and Presentations


July 2016

The Allied Genetics Conference 2016 in Orlando, FL (click my talk )

June 2015

ASBMB Symposium on Evolution and Core Processes in Gene Regulation at Washington University in St. Louis

May 2015 27th Annual Genetics Day at UR
Title: Drosophila X-linked Genes Have Lower Translational Rates than Autosomal Genes
May 2015 CIRC 2015 Poster Session at UR
Title: Drosophila X-linked Genes Have Lower Translational Rates than Autosomal Genes
September 2013 Penn State Postdoc Research Exhibition
Title: Evolution of the Sex-lethal Gene in Insects and Origin of the Sex-Determination System in Drosophila
July, 2013 2013 Annual SMBE meeting
Title: Evolution of the Sex-lethal Gene in Insects and Origin of the Sex-Determination System in Drosophila
September, 2011 Bioinformatics and Genomics Retreat at Penn State
Title: GCD-a New Method to Cluster Genes into Gene Families
May, 2011 Penn State Postdoc Research Exhibition
Title: Functions and Evolution of Mammal-Specific Gene Families
March, 2011 The 2011 SMBE symposium at Penn State
Title: Functions and Evolution of Mammal-Specific Gene Families
December, 2010 IMEG Seminar
Title: Functions and Evolution of Mammal-Specific Gene Families
   
 
     
 

Hurst Lab | Kong Lab | Nei Lab | Presgraves Lab

University of Rochester | Department of Biology

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Last update: 02/28/2017

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